bioluigi.tasks package ====================== Submodules ---------- bioluigi.tasks.bcftools module ------------------------------ .. automodule:: bioluigi.tasks.bcftools :members: :undoc-members: :show-inheritance: bioluigi.tasks.cutadapt module ------------------------------ .. automodule:: bioluigi.tasks.cutadapt :members: :undoc-members: :show-inheritance: bioluigi.tasks.fastqc module ---------------------------- .. automodule:: bioluigi.tasks.fastqc :members: :undoc-members: :show-inheritance: bioluigi.tasks.gatk module -------------------------- .. automodule:: bioluigi.tasks.gatk :members: :undoc-members: :show-inheritance: bioluigi.tasks.multiqc module ----------------------------- .. automodule:: bioluigi.tasks.multiqc :members: :undoc-members: :show-inheritance: bioluigi.tasks.rsem module -------------------------- .. automodule:: bioluigi.tasks.rsem :members: :undoc-members: :show-inheritance: bioluigi.tasks.samtools module ------------------------------ .. automodule:: bioluigi.tasks.samtools :members: :undoc-members: :show-inheritance: bioluigi.tasks.sratoolkit module -------------------------------- .. automodule:: bioluigi.tasks.sratoolkit :members: :undoc-members: :show-inheritance: bioluigi.tasks.star module -------------------------- .. automodule:: bioluigi.tasks.star :members: :undoc-members: :show-inheritance: bioluigi.tasks.utils module --------------------------- .. automodule:: bioluigi.tasks.utils :members: :undoc-members: :show-inheritance: bioluigi.tasks.vep module ------------------------- .. automodule:: bioluigi.tasks.vep :members: :undoc-members: :show-inheritance: Module contents --------------- .. automodule:: bioluigi.tasks :members: :undoc-members: :show-inheritance: